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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. -, Transcribed locus, strongly similar to NP_001032217.1 protocadherin gamma-A1 precursor [Rattus norvegicus]
Sequence ID:AV446640
Entrez Gene ID:192682

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:18: 37668952 - 37841870


Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_291055  NP_291052  NP_291065  NP_291070  NP_291062  NP_291067  NP_291063  NP_291059  NP_291071  NP_291056  NP_291068  NP_291072  NP_291073  NP_291057  NP_291066  NP_291054  NP_291064  NP_291060  NP_291069  NP_291058  NP_291053  NP_291061  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033574 NP_291052 Q7TQF1 Cadherin
Cadherin_2
NM_033575 NP_291053 Q91XX7 Cadherin
Cadherin_2
NM_033576 NP_291054 Q91XX6 Cadherin
Cadherin_2
NM_033577 NP_291055 Q91XX5 Cadherin
Cadherin_2
NM_033578 NP_291056 Q91XX4 Cadherin
Cadherin_2
NM_033579 NP_291057 Q91XX3 Cadherin
Cadherin_2
NM_033580 NP_291058 Q91XX2 Cadherin
Cadherin_2
NM_033581 NP_291059 Q91XX1 Cadherin
Cadherin_2
NM_033582 NP_291060 Q91XX0 Cadherin
Cadherin_2
NM_033583 NP_291061 Q91XW9 Cadherin
Cadherin_2
NM_033584 NP_291062 Q91XZ0 Cadherin
Cadherin_2
NM_033585 NP_291063 Q91XY6 Cadherin
Cadherin_2
NM_033586 NP_291064 Q91XY5 Cadherin
Cadherin_2
NM_033587 NP_291065 Q80Y31 Cadherin
Cadherin_2
NM_033588 NP_291066 Q91XY3 Cadherin
Cadherin_2
NM_033589 NP_291067 Q91XY2 Cadherin
Cadherin_2
NM_033590 NP_291068 Q6DD96 Cadherin
Cadherin_2
NM_033591 NP_291069 Q91XY0 Cadherin
Cadherin_2
NM_033592 NP_291070 Q91XX9 Cadherin
Cadherin_2
NM_033593 NP_291071 Q91XY9 Cadherin
Cadherin_2
NM_033594 NP_291072 Q91XY8 Cadherin
Cadherin_2
NM_033595 NP_291073 Q91XY7 Cadherin
Cadherin_2

Related Sequences

 
mRNAGenPeptSwissProt
U88550 AAD00652 Q9Z1B0
BC035540 AAH35540 Q91XY9
BC049814 AAH49814 Q80Y31
BC054528 AAH54528 Q91XY7
BC054555 AAH54555 Q6PHX8
BC054556 AAH54556 Q91XX4
BC054557 AAH54557 Q91XX7
BC054741 AAH54741 Q7TQF1
BC054787 AAH54787 Q91XY0
BC056998 AAH56998 Q91XY7
BC057404 AAH57404 Q91XY3
BC059175 AAH59175 Q91XX1
BC059837 AAH59837 Q91XY8
BC060691 AAH60691 Q91XY5
BC064675 AAH64675 Q91XY8
BC064808 AAH64808 Q91XX0
BC066823 AAH66823 Q6NXY6
BC066851 AAH66851 Q6NXW8
BC077712 AAH77712 Q6DD96
BC079567 AAH79567 Q91XX9
BC080852 AAH80852 Q91XY2
BC098367 AAH98367 Q4KMS2
BC098457 AAH98457 Q4KMN6
BC138677 AAI38678 Q91XW9
BC138678 AAI38679 Q91XW9
BC138701 AAI38702 Q91XX6
BC139099 AAI39100 Q91XX2
BC139100 AAI39101 Q91XX2
BC139178 AAI39179 Q91XY6
BC160199 AAI60199  
BC167188 AAI67188  
AY013792 AAK26081 Q91XZ0
AY013793 AAK26082 Q91XY9
AY013794 AAK26083 Q91XY8
AY013795 AAK26084 Q91XY7
AY013796 AAK26085 Q91XY6
AY013797 AAK26086 Q91XY5
AY013798 AAK26087 Q91XY4
AY013799 AAK26088 Q91XY3
AY013800 AAK26089 Q91XY2
AY013801 AAK26090 Q91XY1
AY013802 AAK26091 Q91XY0
AY013803 AAK26092 Q91XX9
AY013804 AAK26093 Q91XX8
AY013805 AAK26094 Q91XX7
AY013806 AAK26095 Q91XX6
AY013807 AAK26096 Q91XX5
AY013808 AAK26097 Q91XX4
AY013809 AAK26098 Q91XX3
AY013810 AAK26099 Q91XX2
AY013811 AAK26100 Q91XX1
AY013812 AAK26101 Q91XX0
AY013813 AAK26102 Q91XW9
AF464151 AAM93554 Q8K4A9
AF464152 AAM93555 Q8K4A8
AF464156 AAM93559 Q8K4A6
AF464158 AAM93561 Q8K4A4
AF464160 AAM93563 Q8K4A2
AF464163 AAM93564 Q91XW9
AF464164 AAM93565 Q8K4A1
AF464165 AAM93566 Q8K4A0
AF464166 AAM93567 Q8K499
AK029267 BAC26363 Q8CE10
AK034910 BAC28880 Q8BS92
AK043161 BAC31482 Q8C924
AK043491 BAC31558 Q8C8Z4
AK083581 BAC38958 Q8BNI7
AB093250 BAC41434 Q8CHE5
AK220461 BAD90279 Q5DTQ9
AK139349 BAE23971 Q3UTK9
AK139465 BAE24021 Q3UTF9