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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Cnot6, CCR4-NOT transcription complex, subunit 6
Sequence ID:NM_212484
Entrez Gene ID:104625
Ensembl ID:ENSMUSG00000020362

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 49671505 - 49674992

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6840162Full LengthBC062950CCR4-NOT transcription complex, subunit 6
4504748IncompleteBC016236CCR4-NOT transcription complex, subunit 6
5010999IncompleteBC026579CCR4-NOT transcription complex, subunit 6
5148235IncompleteBC057190CCR4-NOT transcription complex, subunit 6
5151240IncompleteBC049984CCR4-NOT transcription complex, subunit 6
5343685IncompleteBC023766CCR4-NOT transcription complex, subunit 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_997649  

Protein Infomation

NM_212484 NP_997649   LRR_1

Related Sequences

BC049984 AAH49984 Q8K3P5
BC057190 AAH57190 Q8K3P5
BC062950 AAH62950 Q8K3P5
AY043269 AAK85707 Q8K3P5
AK129307 BAC98117 Q8K3P5
AK169707 BAE41319 Q3TEC9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Cnot6 NP_997649 R.norvegicus Cnot6 287249   NP_001013878 100
H.sapiens CNOT6 57472 Gene Info NP_056270 96
A.gambiae AgaP_AGAP004405 1274550   XP_313691 60
D.melanogaster twin 42880   NP_732964 58
C.elegans ccr-4 178184   NP_001023608 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)