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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rtn3, reticulon 3
Sequence ID:NM_001003930
NM_001003933
NM_001003934
NM_001271486
NM_001271487
NM_053076
Entrez Gene ID:20168
Ensembl ID:ENSMUSG00000024758

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 7427002 - 7483281

 Exon Info From UCSC:
NM_001003933
NM_001003934
NM_053076

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6839323Full LengthBC079882reticulon 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444306  NP_001003933  NP_001003934  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003933 NP_001003933   Reticulon
NM_001003934 NP_001003934 Q9ES97 Reticulon
NM_001271486 NP_001258415    
NM_001271487 NP_001258416    
NM_053076 NP_444306 Q9ES97 Reticulon

Related Sequences

 
mRNAGenPeptSwissProt
AF195940 AAG31360 Q9ES97
BC014697 AAH14697 Q9ES97
BC036717 AAH36717 Q9ES97
BC079882 AAH79882 Q9ES97
AY164700 AAP47278 Q9ES97
AY427822 AAR08193 Q9ES97
AY507126 AAR98631 Q9ES97
AY507127 AAR98632 Q9ES97
AY750849 AAU81931 Q9ES97
AB046114 BAB62070 Q9ES97
AK032109 BAC27708 Q9ES97
AK036892 BAC29625 Q9ES97
AK049845 BAC33952 Q9ES97
AK054345 BAC35739 Q8C6L4
AK075883 BAC36028 Q9ES97
AK088670 BAC40493 Q9ES97
AK146505 BAE27220 Q9ES97
AK148792 BAE28664 Q9ES97
AK148947 BAE28699 Q9ES97
AK165683 BAE38336 Q9ES97
BK001796 DAA01968 Q9ES97

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rtn3 NP_001003934 R.norvegicus Rtn3 140945   NP_543185 89
H.sapiens RTN3 10313 Gene Info NP_958831 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)