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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Pitx2, paired-like homeodomain transcription factor 2
Sequence ID:NM_001042502
Entrez Gene ID:18741
Ensembl ID:ENSMUSG00000028023

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3|3 57.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 129214383 - 129219067

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30606653Full LengthBC075660paired-like homeodomain transcription factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035228  

Protein Infomation

NM_001042502 NP_001035967    
NM_001042504 NP_001035969    
NM_011098 NP_035228 P97474 Homeobox

Related Sequences

U80036 AAB38505 P97474
U70132 AAB38864 P97474
AF048723 AAC40086 P97474
AF048724 AAC40087 P97474
U80010 AAC53119 P97474
U80011 AAC53120 P97474
AF201091 AAF44618 P97474
BC075660 AAH75660 Q6DIA6
AB006320 BAA75247 P97474
AB006321 BAA75248 P97474
AK035083 BAC28939 Q8BS64
AJ243597 CAB65259 P97474
AM940438 CAP79627 B1VD84
AM940439 CAP91067 B1VD85

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pitx2 NP_001035967 R.norvegicus Pitx2 54284   NP_001035970 99
H.sapiens PITX2 5308 Gene Info NP_000316 98
D.melanogaster Ptx1 43664   NP_001138130 60
A.gambiae AgaP_AGAP000190 1272074   XP_310944 57
C.elegans unc-30 178265   NP_001021276 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta