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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Sequence ID:NM_053124
Entrez Gene ID:93762
Ensembl ID:ENSMUSG00000031715

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 80700412 - 80739111

 Exon Info From UCSC:
NM_053124

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6409140Full LengthBC053069SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444354  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053124 NP_444354 Q91ZW3 SNF2_N
Myb_DNA-binding
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProt
BC021922 AAH21922 Q91ZW3
BC053069 AAH53069 Q91ZW3
AF325921 AAK52454 Q91ZW3
AF375046 AAL25793 Q91ZW3
AK039811 BAC30458 Q91ZW3
AK052320 BAC34934 Q91ZW3
AK156915 BAE33896 Q3U0F8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarca5 NP_444354 R.norvegicus Smarca5 307766   NP_001100889 100
H.sapiens SMARCA5 8467 Gene Info NP_003592 98
A.thaliana CHR11 819814   NP_001189827 58
A.thaliana CHR17 831980   NP_568365 58
N.crassa NCU03875 3872686   XP_956548 55
S.cerevisiae ISW1 852547   NP_009804 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)