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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc1a1, solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
Sequence ID:NM_009199
Entrez Gene ID:20510
Ensembl ID:ENSMUSG00000024935

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 28835134 - 28913959

 Exon Info From UCSC:
NM_009199

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30029501Full LengthBC064797solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
30364069Full LengthBC065099solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033225  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009199 NP_033225 P51906 SDF

Related Sequences

 
mRNAGenPeptSwissProt
U75214 AAB71739 Q9QWI2
U73521 AAB80694 P51906
BC064797 AAH64797 Q6P1Z8
BC065099 AAH65099 P51906
D43797 BAA07855 P51906
AK018188 BAB31114 Q9D393

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc1a1 NP_033225 R.norvegicus Slc1a1 25550   NP_037164 97
H.sapiens SLC1A1 6505 Gene Info NP_004161 90
A.gambiae AgaP_AGAP006718 1270340   XP_309025 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)