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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifne, interferon epsilon
Sequence ID:NM_177348
Entrez Gene ID:230405
Ensembl ID:ENSMUSG00000045364

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88879537 - 88880201

NM_177348 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16648852544188526104

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40050053Full LengthBC104376interferon epsilon
40050054Full LengthBC104377interferon epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796322  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177348 NP_796322 Q80ZF2 Interferon

Related Sequences

 
mRNAGenPeptSwissProt
BC104376 AAI04377 Q80ZF2
BC104377 AAI04378 Q80ZF2
AY190044 AAO38685 Q80ZF2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifne NP_796322 R.norvegicus RGD1565065 298225   XP_002729545 76
H.sapiens IFNE 338376 Gene Info NP_795372 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)