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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pou4f1, POU domain, class 4, transcription factor 1
Sequence ID:NM_011143
Entrez Gene ID:18996
Ensembl ID:ENSMUSG00000048349

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14|14 E1-E3

Chromosomal Position (from UCSC)

Chromosomal Position:14: 104462335 - 104463338

NM_011143 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
52225104861540104863760
22263412104864901104866087
34133801104866827104867215

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035273  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011143 NP_035273 Q64FM2
P17208
Homeobox
Pou

Related Sequences

 
mRNAGenPeptSwissProt
AY706205 AAU13951 Q64FM2
X51959 CAA36218 P17208

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pou4f1 NP_035273 R.norvegicus Pou4f1 114503   XP_341373 100
H.sapiens POU4F1 5457 Gene Info NP_006228 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)