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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vopp1, vesicular, overexpressed in cancer, prosurvival protein 1
Sequence ID:NM_146168
Entrez Gene ID:232023
Ensembl ID:ENSMUSG00000037788

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 57752264 - 57825110

NM_146168 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2124335770225757704669
243425705771242857712564
257126485772470457724781
264927075773997057740028
270829065777492057775118

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5359195Full LengthBC024822expressed sequence AW146242

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_146168 NP_666280 Q8R1C3  

Related Sequences

 
mRNAGenPeptSwissProt
BC024822 AAH24822 Q8R1C3
AK030975 BAC27198 Q8R1C3
AK031812 BAC27562 Q8R1C3
AK158041 BAE34331 Q8R1C3
AK170152 BAE41599 Q8R1C3
AK170832 BAE42060 Q8R1C3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vopp1 NP_666280 R.norvegicus Vopp1 362374   NP_001102100 98
H.sapiens VOPP1 81552 Gene Info NP_110423 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)