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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tmem198b, transmembrane protein 198b
Sequence ID:NM_178066
Entrez Gene ID:73827
Ensembl ID:ENSMUSG00000047090

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128800230 - 128800824

NM_178066 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
221215128237091128238284
12161376128238406128238566
13771958128238991128239572
19592218128240153128240412
22192356128241288128241425

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507848Full LengthBC037624RIKEN cDNA 1110012D08 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164197 NP_001157669    
NM_021412 NP_067387 Q9JHI0 Hemopexin
Peptidase_M10
PG_binding_1
NM_178066 NP_835167 Q8CFU0  

Related Sequences

 
mRNAGenPeptSwissProt
AF155221 AAF73292 Q9JHI0
AF162446 AAF80464 Q9JHI0
AF153199 AAG29880 Q9JHI0
BC037624 AAH37624 Q8CFU0
BC112966 AAI12967 Q2KHP2
AK086808 BAC39747 Q9JHI0
AK136517 BAE23019 Q3UW97

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmem198b NP_835167 R.norvegicus RGD1562342 500762   NP_001102751 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)