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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ctbp2, C-terminal binding protein 2
Sequence ID:NM_001170744
NM_009980
Entrez Gene ID:13017
Ensembl ID:ENSMUSG00000030970

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7 66.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 132987571 - 133123348

 Exon Info From UCSC:
NM_001170744
NM_009980

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4019572Full LengthBC013333C-terminal binding protein 2
4511826Full LengthBC017520C-terminal binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034110  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001170744 NP_001164215    
NM_009980 NP_034110 P56546
Q3UGL5
2-Hacid_dh
2-Hacid_dh_C

Related Sequences

 
mRNAGenPeptSwissProt
AF059735 AAC33873 P56546
Q3UGL5
AF016508 AAC40043 P56546
BC013333 AAH13333 Q91YZ2
BC017520 AAH17520 Q91YZ2
AB033123 BAA85181 P56546
Q3UGL5
AK134399 BAE22127 Q91YZ2
AK146713 BAE27378 Q3UIX8
AK147871 BAE28193 P56546
Q3UGL5
AK166182 BAE38614 Q3TM28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ctbp2 NP_001164215 R.norvegicus Ctbp2 81717   NP_445787 97
H.sapiens CTBP2 1488 Gene Info NP_073713 89
A.gambiae AgaP_AGAP003893 1269481   XP_308121 74
D.melanogaster CtBP 41602   NP_001014617 72
N.crassa NCU00780 3881085   XP_964936 37
S.pombe SPAC186.02c 2542495   NP_595020 35
S.pombe SPAC186.07c 2542600   NP_595025 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)