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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptgr2, prostaglandin reductase 2
Sequence ID:NM_001252625
NM_001252626
NM_029880
Entrez Gene ID:77219
Ensembl ID:ENSMUSG00000072946

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 D3

Chromosomal Position (from UCSC)

Chromosomal Position:12: 84285412 - 84314102

Transcript StartTranscript EndChromosomal Start Chromosomal End
11638562626385626425
1642488563323385633317
2493678563616685636284
3685598563896085639151
5607308564318685643356
7319408564687585647084
94110628564872585648846
106311508564929485649381
115111908565186885651907
119130868565488685656781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5068419Full LengthBC021466prostaglandin reductase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084156  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001252625 NP_001239554      
NM_001252626 NP_001239555      
NM_029880 NP_084156 Q8VDQ1 EC 1.3.1.48 ADH_zinc_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC021466 AAH21466 Q8VDQ1 EC 1.3.1.48
AK021033 BAB32284 Q8VDQ1 EC 1.3.1.48
AK036168 BAC29329 Q8VDQ1 EC 1.3.1.48
AK145232 BAE26315 Q8VDQ1 EC 1.3.1.48
AK159187 BAE34884 Q3TXN1  
AK159932 BAE35493 Q8VDQ1 EC 1.3.1.48
AK168895 BAE40712 Q8VDQ1 EC 1.3.1.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptgr2 NP_084156 R.norvegicus Ptgr2 299194   NP_001015009 93
H.sapiens PTGR2 145482 Gene Info NP_001139626 87
C.elegans M106.3 174671   NP_001076630 47
N.crassa NCU02299 3876081   XP_959943 41
S.cerevisiae YML131W 854908   NP_013575 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)