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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Surf6, surfeit gene 6
Sequence ID:NM_009298
Entrez Gene ID:20935
Ensembl ID:ENSMUSG00000036160

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2 15.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 26890774 - 26902847

NM_009298 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2619792674629126748244
198021802674838626748586
218122692675485626754944
227024732675524826755451
247425932675821326758332

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4952465Full LengthBC037634surfeit gene 6
4910734IncompleteBC026514surfeit gene 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033324  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009298 NP_033324 P70279
Q3V1X4
SURF6

Related Sequences

 
mRNAGenPeptSwissProt
BC026514 AAH26514 P70279
BC037634 AAH37634 P70279
Q3V1X4
AK043984 BAC31725 P70279
AK075636 BAC35872 P70279
AK132194 BAE21025 P70279
Q3V1X4
X92842 CAA63428 P70279
Q3V1X4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Surf6 NP_033324 R.norvegicus Surf6 303076   NP_001015014 88
H.sapiens SURF6 6838 Gene Info NP_006744 74
N.crassa NCU06090 3875699   XP_959552 31
S.pombe SPBC947.07 2541261   NP_595269 31
C.elegans ZK546.14 173854   NP_494907 30
D.melanogaster Surf6 42370   NP_524408 30
A.thaliana AT5G05210 830403   NP_001078531 28
S.cerevisiae RRP14 853780   NP_012841 28
A.gambiae AgaP_AGAP003006 1272946   XP_311877 27
A.gambiae AgaP_AGAP003007 4577124   XP_001237398 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)