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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ankrd17, ankyrin repeat domain 17
Sequence ID:NM_030886
NM_198010
Entrez Gene ID:81702
Ensembl ID:ENSMUSG00000055204

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 90252711 - 90304104

 Exon Info From UCSC:
NM_030886
NM_198010

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5151739IncompleteBC057195ankyrin repeat domain 17
5343724IncompleteBC032169ankyrin repeat domain 17
6488391IncompleteBC080807ankyrin repeat domain 17
30618682IncompleteBC085166ankyrin repeat domain 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_932127  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030886 NP_112148 Q99NH0  
NM_198010 NP_932127   KH_1
Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC039213 AAH39213 Q99NH0
BC057195 AAH57195 Q99NH0
AF130371 AAQ13559 Q99NH0
AK129193 BAC98003 Q99NH0
AK153560 BAE32095 Q3U5I3
AK160263 BAE35720 Q99NH0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ankrd17 NP_112148 H.sapiens ANKRD17 26057 Gene Info NP_115593 97
R.norvegicus Ankrd17 289521   NP_001099469 97
A.gambiae AgaP_AGAP003519 3290856   XP_562353 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)