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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ltc4s, Leukotriene C4 synthase
Sequence ID:NM_008521
Entrez Gene ID:17001
Ensembl ID:ENSMUSG00000020377

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 B1.1-B1.2

Chromosomal Position (from UCSC)

Chromosomal Position:11: 50236468 - 50238471

NM_008521 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12415004997350050213
2423235005051850050599
3243945005069550050765
3954945005084250050941
4955885005187950051972

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1348372Full LengthBC028760leukotriene C4 synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032547  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008521 NP_032547 Q60860 EC 4.4.1.20 MAPEG

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U27195 AAA75042 Q60860 EC 4.4.1.20
BC028760 AAH28760 Q8K355  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ltc4s NP_032547 R.norvegicus Ltc4s 114097   NP_446091 95
H.sapiens LTC4S 4056 Gene Info NP_665874 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)