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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Brca1, breast cancer 1
Sequence ID:NM_009764
Entrez Gene ID:12189
Ensembl ID:ENSMUSG00000017146

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 60.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101489768 - 101524738

 Exon Info From UCSC:
NM_009764

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30431022Full LengthBC068303breast cancer 1
3498707IncompleteBC003248breast cancer 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033894  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009764 NP_033894 P48754 zf-C3HC4
BRCT

Related Sequences

 
mRNAGenPeptSwissProt
U32446 AAA96393 P48754
U35641 AAB17113 P48754
U31625 AAB17114 P48754
U36475 AAC52323 P48754
U68174 AAD00168 Q9Z1D2
BC003248 AAH03248 Q99LI1
BC068303 AAH68303 Q6NV63
AK144702 BAE26023 Q3UMS5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brca1 NP_033894 R.norvegicus Brca1 497672   NP_036646 82
H.sapiens BRCA1 672 Gene Info NP_009225 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta