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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tbp, TATA box binding protein
Sequence ID:NM_013684
Entrez Gene ID:21374
Ensembl ID:ENSMUSG00000014767

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A2|17 8.25 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 15499887 - 15517409

NM_013684 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11371563685115636987
1383011563992815640091
3026751564123715641610
6767631564430615644393
7648551565049315650584
85610231565119315651360
102411181565257915652673
111918421565366715654390

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498542Full LengthBC012685TATA box binding protein
3584341Full LengthBC016476TATA box binding protein
30020603Full LengthBC050136TATA box binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038712  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013684 NP_038712 P29037 TBP

Related Sequences

 
mRNAGenPeptSwissProt
U63933 AAB53097 P29037
BC012685 AAH12685 Q6RI65
P29037
BC016476 AAH16476 Q91YM5
BC050136 AAH50136 P29037
DQ906043 ABL09363 A2T4N7
FJ770049 ACN86312 C0LUL2
D01034 BAA00840 Q6RI65
P29037
AK085037 BAC39346 P29037

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tbp NP_038712 R.norvegicus Tbp 117526   NP_001004198 100
H.sapiens TBP 6908 Gene Info NP_003185 98
A.thaliana TBP2 841999   NP_175948 81
A.thaliana TBP1 820546   NP_187953 80
D.melanogaster Tbp 37476   NP_523805 74
A.gambiae AgaP_AGAP010958 1271006   XP_309748 64
C.elegans tbp-1 176054   NP_498635 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta