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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Echs1, enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
Sequence ID:NM_053119
Entrez Gene ID:93747
Ensembl ID:ENSMUSG00000025465

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F4|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 140105722 - 140116423

NM_053119 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1655147291621147292275
656723147293982147294049
724843147295885147296004
844948147296437147296541
9491048147297594147297693
10491176147298317147298444
11771374147298834147299031
13751491147302205147302321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30357710Full LengthBC072658enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
3487040IncompleteBC002178enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
5028965IncompleteBC057971enoyl Coenzyme A hydratase, short chain, 1, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444349  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_053119 NP_444349 Q8BH95 EC 4.2.1.17 ECH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002178 AAH02178 Q8BH95 EC 4.2.1.17
BC057971 AAH57971 Q8BH95 EC 4.2.1.17
BC072658 AAH72658 Q8BH95 EC 4.2.1.17
AK040391 BAC30583 Q8BH95 EC 4.2.1.17
AK044954 BAC32157 Q8BH95 EC 4.2.1.17
AK086762 BAC39739 Q8BU95  
AK088018 BAC40099 Q8BH95 EC 4.2.1.17
AK167404 BAE39493 Q8BH95 EC 4.2.1.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Echs1 NP_444349 R.norvegicus Echs1 140547   NP_511178 96
H.sapiens ECHS1 1892 Gene Info NP_004083 88
D.melanogaster CG6543 36536   NP_610910 61
C.elegans ech-6 176376   NP_499156 60
A.gambiae AgaP_AGAP011833 1280816   XP_320683 59
N.crassa NCU06448 3873508   XP_957339 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)