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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Otof, otoferlin
Sequence ID:NM_001100395
NM_031875
Entrez Gene ID:83762
Ensembl ID:ENSMUSG00000062372

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 30367069 - 30461902

 Exon Info From UCSC:
NM_001100395
NM_031875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053655Full LengthBC145107otoferlin
9087613Full LengthBC150702otoferlin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114081  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001100395 NP_001093865    
NM_031875 NP_114081 Q9ESF1 C2
FerB
FerI

Related Sequences

 
mRNAGenPeptSwissProt
AF183183 AAG12989 Q9ESF1
AF183184 AAG12990 Q9ESF1
BC145107 AAI45108 B7ZN98
BC150702 AAI50703 Q9ESF1
AY586513 AAT40586 Q9ESF1
AK033317 BAC28229 Q9ESF1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Otof NP_114081 R.norvegicus Otof 84573   XP_001062291 97
H.sapiens OTOF 9381 Gene Info NP_919224 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)