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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ccl4, chemokine (C-C motif) ligand 4
Sequence ID:NM_013652
Entrez Gene ID:20303
Ensembl ID:ENSMUSG00000018930

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 47.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 83662610 - 83664617

NM_013652 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11558347608583476239
1562708347696083477074
2716608347779583478184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734006Full LengthBC119257chemokine (C-C motif) ligand 4
8734008Full LengthBC119259chemokine (C-C motif) ligand 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038680  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013652 NP_038680 P14097
Q5QNV9
IL8

Related Sequences

 
mRNAGenPeptSwissProt
M35590 AAA39708 P14097
Q5QNV9
M23503 AAA40148 P14097
Q5QNV9
AF128218 AAF22559 P14097
Q5QNV9
AF128219 AAF22560 P14097
Q5QNV9
BC119257 AAI19258 Q5QNV9
BC119259 AAI19260 Q5QNV9
AK156948 BAE33909 P14097
Q5QNV9
AK172472 BAE43025 P14097
Q5QNV9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl4 NP_038680 R.norvegicus Ccl4 116637   NP_446310 84
H.sapiens CCL4 6351 Gene Info NP_002975 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta