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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxd10, homeobox D10
Sequence ID:NM_013554
Entrez Gene ID:15430
Ensembl ID:ENSMUSG00000050368

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74691890 - 74694611

NM_013554 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17777453000474530780
77817897453214774533158

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240579Full LengthBC013463homeo box D10
6516538Full LengthBC048690homeo box D10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013554 NP_038582 P28359 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC013463 AAH13463 P28359
BC048690 AAH48690 P28359

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxd10 NP_038582 H.sapiens HOXD10 3236 Gene Info NP_002139 99
R.norvegicus Hoxd10 303991   NP_001100564 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)