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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdia4, Protein disulfide isomerase associated 4
Sequence ID:NM_009787
Entrez Gene ID:12304
Ensembl ID:ENSMUSG00000025823

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B2.3|6 18.0

Chromosomal Position (from UCSC)

Chromosomal Position:6: 47796091 - 47813362

NM_009787 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1308924774613947746901
89311264774836347748596
112712834774918447749340
128414354775093647751087
143615944775342947753587
159518004775370347753908
180119394775650447756642
194021454775700447757209
214623144775817347758341
231526104776321547763510

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055690Full LengthBC141078protein disulfide isomerase associated 4
30465920IncompleteBC066857protein disulfide isomerase associated 4

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009787 NP_033917    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J05186 AAA39907 P08003 EC 5.3.4.1
BC066857 AAH66857 P08003 EC 5.3.4.1
BC141078 AAI41079 P08003 EC 5.3.4.1
AK028292 BAC25863 P08003 EC 5.3.4.1
AK146288 BAE27045 P08003 EC 5.3.4.1
AK150566 BAE29664 P08003 EC 5.3.4.1
AK161534 BAE36446 P08003 EC 5.3.4.1
AK169387 BAE41134 P08003 EC 5.3.4.1
Y00884 CAA68777 P08003 EC 5.3.4.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdia4 NP_033917 R.norvegicus Pdia4 116598   NP_446301 96
H.sapiens PDIA4 9601 Gene Info NP_004902 89
C.elegans erp72 176147   NP_498775 49
A.thaliana PDIL1-1 838779   NP_173594 40
A.thaliana PDIL1-2 844087   NP_177875 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)