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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bnc1, basonuclin 1
Sequence ID:NM_007562
Entrez Gene ID:12173
Ensembl ID:ENSMUSG00000025105

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 D3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 81974604 - 81978430

NM_007562 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123668911154789113912
236742228911807589119930
422344588912209489122329
445945588912330389123402
455946638913708089137184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066299Full LengthBC165999basonuclin 1
40049810IncompleteBC127226basonuclin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031588  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007562 NP_031588 O35914 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
AF025301 AAB94675 O35914
U88064 AAC53347 O35914
BC127226 AAI27227 A1L0X0
BC165999 AAI65999  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bnc1 NP_031588 R.norvegicus Bnc1 365299   NP_001102386 95
H.sapiens BNC1 646 Gene Info NP_001708 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)