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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ttpa, tocopherol (alpha) transfer protein
Sequence ID:NM_015767
Entrez Gene ID:50500
Ensembl ID:ENSMUSG00000073988

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A3|4 22.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 20008439 - 20028558

NM_015767 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12161993557419935789
2173701994177719941930
3715641994833819948531
5656751995093119951041
67630531995555419957931

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40040166Full LengthBC099868tocopherol (alpha) transfer protein
40040167Full LengthBC099869tocopherol (alpha) transfer protein
40040169Full LengthBC099870tocopherol (alpha) transfer protein
3990597IncompleteBC026882tocopherol (alpha) transfer protein
40040170IncompleteBC099871tocopherol (alpha) transfer protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015767 NP_056582 Q8BWP5
Q499J3
CRAL_TRIO
CRAL_TRIO_N

Related Sequences

 
mRNAGenPeptSwissProt
AF218416 AAF25956 Q8BWP5
BC026882 AAH26882 Q8QZU5
BC043705 AAH43705  
BC099868 AAH99868 Q8BWP5
Q499J3
BC099869 AAH99869 Q8BWP5
Q499J3
BC099870 AAH99870 Q8BWP5
Q499J3
BC099871 AAH99871 Q499J1
AK004882 BAB23640 Q8BWP5
AK050374 BAC34218 Q8BWP5
Q499J3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ttpa NP_056582 R.norvegicus Ttpa 25571   NP_037180 94
H.sapiens TTPA 7274 Gene Info NP_000361 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)