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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bhlhe40, basic helix-loop-helix family, member e40
Sequence ID:NM_011498
Entrez Gene ID:20893
Ensembl ID:ENSMUSG00000030103

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 E-F1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 108660696 - 108666774

NM_011498 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1364108610622108610985
365434108611154108611223
435542108611498108611605
543666108612514108612637
6673113108614472108616918

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3707474Full LengthBC010720basic helix-loop-helix family, member e40
3707901IncompleteBC094057basic helix-loop-helix family, member e40

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035628  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011498 NP_035628 O35185
Q542A5
HLH
Hairy_orange

Related Sequences

 
mRNAGenPeptSwissProt
AF010305 AAB64228 O35185
Q542A5
BC010720 AAH10720 O35185
Q542A5
BC094057 AAH94057 Q52L58
AF364051 AAK50859 O35185
Q542A5
AK048242 BAC33281 O35185
Q542A5
AK090032 BAC41056 O35185
Q542A5
AK154935 BAE32936 O35185
Q542A5
Y07836 CAA69169 O35185

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bhlhe40 NP_035628 R.norvegicus Bhlhe40 79431   NP_445780 97
H.sapiens BHLHE40 8553 Gene Info NP_003661 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)