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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H1f0, H1 histone family, member 0
Sequence ID:NM_008197
Entrez Gene ID:14958
Ensembl ID:ENSMUSG00000096210

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15 46.75 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 79028449 - 79030498

NM_008197 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122897885864178860929

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600538Full LengthBC003830H1 histone family, member 0
4166167Full LengthBC011493H1 histone family, member 0
5343233Full LengthBC110361H1 histone family, member 0

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032223  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008197 NP_032223 P10922 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC003830 AAH03830 P10922
BC011493 AAH11493 P10922
BC110361 AAI10362 P10922
AK051213 BAC34559 P10922
AK077473 BAC36817 P10922
AK090029 BAC41054 Q8C1Y3
AK145675 BAE26583 P10922
AK146077 BAE26881 P10922
AK153990 BAE32300 Q3U4Y0
AK155312 BAE33183 Q3U4Y0
X13171 CAA31569 P10922

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H1f0 NP_032223 R.norvegicus H1f0 24437   NP_036710 98
H.sapiens H1F0 3005 Gene Info NP_005309 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)