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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lmna, lamin A
Sequence ID:NM_001002011
NM_001111102
NM_019390
Entrez Gene ID:16905
Ensembl ID:ENSMUSG00000028063

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 42.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 88481148 - 88503307

 Exon Info From UCSC:
NM_001002011
NM_001111102
NM_019390

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4187374Full LengthBC094020lamin A
4240057Full LengthBC015302lamin A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002011 NP_001002011 P48678  
NM_001111102 NP_001104572    
NM_019390 NP_062263    

Related Sequences

 
mRNAGenPeptSwissProt
BC015302 AAH15302 P48678
BC094020 AAH94020 P48678
DQ832702 ABI16251 B3RH23
DQ832703 ABI16252 B3RH24
D13181 BAA02476 P48678
D14850 BAA03578 P48678
AK003174 BAB22619 Q9CTL2
AK004619 BAB23415 P48678
AK079972 BAC37795 Q8BNX5
AK147150 BAE27717 P48678
AK149998 BAE29226 P48678
AK150391 BAE29519 Q3UCU3
AK150501 BAE29614 P48678
AK150624 BAE29714 P48678
AK152539 BAE31294 P48678
AK152646 BAE31384 Q3U7I5
AK152846 BAE31539 Q3U733
AK161221 BAE36246 P48678
AK167858 BAE39876 P48678
X14170 CAA32372 P48678

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lmna NP_001002011 H.sapiens LMNA 4000 Gene Info NP_733821 97
R.norvegicus Lmna 60374   NP_001002016 90
A.gambiae AgaP_AGAP008015 1277933   XP_317447 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta