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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Usp9x, ubiquitin specific peptidase 9, X chromosome
Sequence ID:NM_009481
Entrez Gene ID:22284
Ensembl ID:ENSMUSG00000031010

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.1|X 5.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 13171716 - 13173325

 Exon Info From UCSC:
NM_009481

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033507  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009481 NP_033507 P70398 EC 3.4.19.12 UCH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U67874 AAB07731 P70398 EC 3.4.19.12
DQ086491 AAY99447 Q4FE56  
AK034941 BAC28889 Q8BS89  
AK045427 BAC32360 Q8BR77  
AK049283 BAC33657 Q8C7T5  
Z78153 CAB01555 P70398 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Usp9x NP_033507 R.norvegicus Usp9x 363445   NP_001129395 100
H.sapiens USP9X 8239 Gene Info NP_001034679 98
D.melanogaster faf 43749   NP_524612 51
A.gambiae AgaP_AGAP010088 1279518   XP_319246 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)