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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bcat2, branched chain aminotransferase 2, mitochondrial
Sequence ID:NM_001243052
NM_001243053
NM_009737
Entrez Gene ID:12036
Ensembl ID:ENSMUSG00000030826

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, prostate, salivary gland, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 45570357 - 45589347


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4166264Full LengthBC048072branched chain aminotransferase 2, mitochondrial
4242224Full LengthBC017688branched chain aminotransferase 2, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033867  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001243052 NP_001229981      
NM_001243053 NP_001229982      
NM_009737 NP_033867 Q3ULU3
O35855
EC 2.6.1.42 Aminotran_4

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U68526 AAB67674 O35855 EC 2.6.1.42
AF031467 AAC96067 O88374  
BC017688 AAH17688 Q3ULU3
O35855
EC 2.6.1.42
BC048072 AAH48072 Q3ULU3
O35855
EC 2.6.1.42
AK037482 BAC29815 Q8CAX1  
AK137049 BAE23217 O88374  
AK145300 BAE26355 Q3ULU3
O35855
EC 2.6.1.42
AK160159 BAE35664 O88374  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bcat2 NP_033867 R.norvegicus Bcat2 64203   NP_071795 93
H.sapiens BCAT2 587 Gene Info NP_001181 84
C.elegans bcat-1 181423   NP_510144 51
S.cerevisiae BAT1 856615   NP_012078 47
S.pombe eca39 2540831   NP_595180 47
N.crassa NCU04754 3876434   XP_960287 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)