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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1
Sequence ID:NM_026152
Entrez Gene ID:67432
Ensembl ID:ENSMUSG00000025176

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19|19 D1

Chromosomal Position (from UCSC)

Chromosomal Position:19: 42045850 - 42070939

NM_026152 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12604212034042120599
2613894213437742134505
3905174213465642134783
5186524213541742135551
6537494213579242135888
7508834213768142137814
88416354214467742145428

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4235003Full LengthBC016430RIKEN cDNA 0610010D20 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080428  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_026152 NP_080428 Q9DCU9 EC 4.1.3.16 DHDPS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016430 AAH16430 Q9DCU9 EC 4.1.3.16
AK002457 BAB22114 Q9DCU9 EC 4.1.3.16
AK010857 BAB27226 Q9DCU9 EC 4.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoga1 NP_080428 R.norvegicus Hoga1 293949   NP_001099825 96
H.sapiens HOGA1 112817 Gene Info NP_612422 89
N.crassa NCU05977 3874777   XP_958630 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)