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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Aars, alanyl-tRNA synthetase
Sequence ID:NM_146217
Entrez Gene ID:234734
Ensembl ID:ENSMUSG00000031960

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 111034091 - 111055565

 Exon Info From UCSC:
NM_146217

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4196789Full LengthBC033273alanyl-tRNA synthetase
4976684IncompleteBC026611alanyl-tRNA synthetase
5707687IncompleteBC058620alanyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666329  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_028274 NP_082550 Q8BTW3   RNase_PH
NM_146217 NP_666329 Q8BGQ7 EC 6.1.1.7 tRNA-synt_2c
DHHA1
tRNA_SAD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC026611 AAH26611 Q8R346  
BC033273 AAH33273 Q8BGQ7 EC 6.1.1.7
BC058620 AAH58620 Q6PDM7  
BC116985 AAI16986 Q8BTW3  
BC119082 AAI19083 Q8BTW3  
AY223875 AAP57355 Q6XMP4  
AK012102 BAB28033 Q8BTW3  
AK044451 BAC31927 Q8BGQ7 EC 6.1.1.7
AK085725 BAC39520 Q8BGQ7 EC 6.1.1.7
AK088532 BAC40407 Q8BTW3  
AK150227 BAE29394 Q3UD67  
AK158139 BAE34378 Q3TZ32  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aars NP_666329 R.norvegicus Aars 292023   NP_001093987 98
H.sapiens AARS 16 Gene Info NP_001596 96
A.gambiae AgaP_AGAP009701 1279087   XP_318757 61
D.melanogaster Aats-ala 34156   NP_523511 61
C.elegans ars-2 171985   NP_491281 59
S.cerevisiae ALA1 854513   NP_014980 52
A.thaliana ALATS 841442   NP_001185186 51
S.pombe ala1 2542031   NP_593640 50
N.crassa NCU02566 3881815   XP_965697 47
P.falciparum PF13_0354 814313   XP_001350388 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)