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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gpm6a, glycoprotein m6a
Sequence ID:NM_001253754
NM_001253756
NM_153581
Entrez Gene ID:234267
Ensembl ID:ENSMUSG00000031517

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 54989890 - 54991839

Transcript StartTranscript EndChromosomal Start Chromosomal End
15885604008056040667
5897815612268056122872
7829385613258756132743
93910925613545756135610
109311695614012456140200
117012355614072856140793
123633365614412956146229

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5041793Full LengthBC023461glycoprotein m6a
5358632Full LengthBC029711glycoprotein m6a
5363493Full LengthBC033357glycoprotein m6a
5364039Full LengthBC024759glycoprotein m6a
5364685Full LengthBC033394glycoprotein m6a
5365175Full LengthBC029683glycoprotein m6a
6810388Full LengthBC043130glycoprotein m6a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705809  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253754 NP_001240683    
NM_001253756 NP_001240685    
NM_153581 NP_705809 P35802
Q542P2
Myelin_PLP

Related Sequences

 
mRNAGenPeptSwissProt
S65735 AAB28350 P35802
BC023461 AAH23461 Q8R1P3
BC024759 AAH24759 P35802
Q542P2
BC029683 AAH29683 P35802
Q542P2
BC029711 AAH29711 P35802
Q542P2
BC033357 AAH33357 P35802
Q542P2
BC033394 AAH33394 P35802
Q542P2
BC043130 AAH43130 P35802
Q542P2
AK053538 BAC35419 P35802
Q542P2
AK081877 BAC38356 P35802
Q542P2
AK147245 BAE27793 P35802
Q542P2
AK147280 BAE27817 P35802
Q542P2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpm6a NP_705809 H.sapiens GPM6A 2823 Gene Info NP_005268 99
R.norvegicus Gpm6a 306439   NP_835206 99
D.melanogaster M6 40383   NP_730642 33
A.gambiae AgaP_AGAP012018 1280652   XP_320513 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)