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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scin, scinderin
Sequence ID:NM_001146196
NM_009132
Entrez Gene ID:20259
Ensembl ID:ENSMUSG00000002565

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 B1|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 40059772 - 40134183

 Exon Info From UCSC:
NM_001146196
NM_009132

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30314464Full LengthBC063328scinderin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033158  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146196 NP_001139668 Q60604  
NM_009132 NP_033158   Gelsolin

Related Sequences

 
mRNAGenPeptSwissProt
U04354 AAB61682 Q60604
BC063328 AAH63328 Q60604
AK173295 BAD32573 Q69Z71
AK133484 BAE21681 Q60604
AK136080 BAE22809 Q3UWV5
Y13971 CAA74304 Q60604

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scin NP_001139668 R.norvegicus Scin 298975   NP_942043 98
H.sapiens SCIN 85477 Gene Info NP_001106177 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)