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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atad3a, ATPase family, AAA domain containing 3A
Sequence ID:NM_179203
Entrez Gene ID:108888
Ensembl ID:ENSMUSG00000029036

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 155741163 - 155761070

 Exon Info From UCSC:
NM_179203

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3671787Full LengthBC023301ATPase family, AAA domain containing 3A
6530155Full LengthBC060036ATPase family, AAA domain containing 3A
6828037Full LengthBC058373ATPase family, AAA domain containing 3A
5150438IncompleteBC047047ATPase family, AAA domain containing 3A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_179203 NP_849534 Q925I1  

Related Sequences

 
mRNAGenPeptSwissProt
BC023301 AAH23301 Q925I1
BC058373 AAH58373 Q925I1
BC060036 AAH60036 Q925I1
AF343079 AAK38648 Q925I1
AK075921 BAC36055 Q925I1
AK173141 BAD32419 Q925I1
AK148974 BAE28707 Q925I1
AK149702 BAE29037 Q925I1
AK150037 BAE29259 Q925I1
AK154077 BAE32359 Q3U4S2
AK166099 BAE38570 Q925I1
AK172038 BAE42791 Q925I1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atad3a NP_849534 R.norvegicus Atad3a 298682   NP_001030094 98
H.sapiens ATAD3A 55210 Gene Info NP_001164006 93
H.sapiens ATAD3B 83858 Gene Info NP_114127 88
D.melanogaster bor 53565   NP_524996 63
A.gambiae AgaP_AGAP001792 1281323   XP_321276 60
C.elegans F54B3.3 174590   NP_496210 57
A.thaliana AT3G03060 821146   NP_186956 40
A.thaliana AT5G16930 831556   NP_197195 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)