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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clip1, CAP-GLY domain containing linker protein 1
Sequence ID:NM_019765
Entrez Gene ID:56430
Ensembl ID:ENSMUSG00000049550

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 123577803 - 123579057

 Exon Info From UCSC:
NM_019765

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3592614Full LengthBC007191CAP-GLY domain containing linker protein 1
3986143IncompleteBC029243restin (Reed-Steinberg cell-expressed intermediate filament-associated protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062739  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019765 NP_062739 Q922J3 CAP_GLY

Related Sequences

 
mRNAGenPeptSwissProt
AF185286 AAD56414 Q9QZF4
BC007191 AAH07191 Q922J3
AK029945 BAC26693 Q8C0S5
AK220172 BAD90357 Q922J3
AK162707 BAE37030 Q3TNV7
AK164962 BAE37980 Q3TNV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clip1 NP_062739 H.sapiens CLIP1 6249 Gene Info NP_002947 90
A.gambiae AgaP_AGAP009210 1280169   XP_319987 32
D.melanogaster CLIP-190 35042   NP_609835 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta