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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C3ar1, complement component 3a receptor 1
Sequence ID:NM_009779
Entrez Gene ID:12267
Ensembl ID:ENSMUSG00000040552

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 F1

Chromosomal Position (from UCSC)

Chromosomal Position:6: 122848509 - 122856158

NM_009779 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14125122797157122801281
41264299122806001122806174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593758Full LengthBC003728complement component 3a receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033909  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009779 NP_033909 Q5U7A4
O09047
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U77460 AAC53203 Q5U7A4
O09047
BC003728 AAH03728 Q5U7A4
O09047
AY786554 AAV51803 Q5U7A4
O09047
AK054017 BAC35622 Q8C6R2
AK154134 BAE32398 Q3U4N3
AK154229 BAE32449 Q5U7A4
O09047
AK154609 BAE32711 Q5U7A4
O09047

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C3ar1 NP_033909 R.norvegicus C3ar1 84007   NP_114449 82
H.sapiens C3AR1 719 Gene Info NP_004045 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)