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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sod3, superoxide dismutase 3, extracellular
Sequence ID:NM_011435
Entrez Gene ID:20657
Ensembl ID:ENSMUSG00000072941

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C1|5 31.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 52367938 - 52368783

NM_011435 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12495275504252755290
25020455275918152760976

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3983917Full LengthBC010975superoxide dismutase 3, extracellular

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035565  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011435 NP_035565 O09164
Q542X9
EC 1.15.1.1 Sod_Cu

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U38261 AAB51106 O09164
Q542X9
EC 1.15.1.1
AF076286 AAC26522 O88592  
BC010975 AAH10975 Q64466  
D50856 BAA23493 O09164
Q542X9
EC 1.15.1.1
AK075570 BAC35828 O09164
Q542X9
EC 1.15.1.1
AK145194 BAE26286 Q3UM12  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sod3 NP_035565 R.norvegicus Sod3 25352   NP_037012 86
H.sapiens SOD3 6649 Gene Info NP_003093 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta