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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ppp2r5c, protein phosphatase 2, regulatory subunit B (B56), gamma isoform
Sequence ID:NM_001037934
NM_001081457
NM_001081458
NM_001135001
NM_012023
Entrez Gene ID:26931
Ensembl ID:ENSMUSG00000017843

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12 F1|12 57.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 110485888 - 110580552

 Exon Info From UCSC:
NM_001081457
NM_001081458
NM_001135001
NM_012023

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3489999Full LengthBC003979protein phosphatase 2, regulatory subunit B (B56), gamma isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036153  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081457 NP_001074926    
NM_001081458 NP_001074927    
NM_001135001 NP_001128473    
NM_012023 NP_036153 Q60996 B56

Related Sequences

 
mRNAGenPeptSwissProt
U37353 AAC52435 Q60996
BC003979 AAH03979 Q60996
AY389498 AAR26474 Q60996
AB055635 BAB32447 Q60996
AB055636 BAB32448 Q60996
AK047089 BAC32957 Q8C8H4
AK129042 BAC97852 Q6ZQK4
AK161855 BAE36607 Q3TSR8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppp2r5c NP_036153 R.norvegicus Ppp2r5c 691318   XP_001077680 99
A.thaliana AT3G21650 821719   NP_188802 55
A.thaliana ATB' GAMMA 827211   NP_849390 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)