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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nipbl, Nipped-B homolog (Drosophila)
Sequence ID:NM_027707
NM_201232
Entrez Gene ID:71175
Ensembl ID:ENSMUSG00000022141

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 A2

Chromosomal Position (from UCSC)

Chromosomal Position:15: 8291224 - 8444463

 Exon Info From UCSC:
NM_027707
NM_201232

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5354629IncompleteBC025455Nipped-B homolog (Drosophila)
9094370IncompleteBC172860RIKEN cDNA 4933421G18 gene
9094371IncompleteBC172861RIKEN cDNA 4933421G18 gene
9094374IncompleteBC172864RIKEN cDNA 4933421G18 gene
9094375IncompleteBC172865RIKEN cDNA 4933421G18 gene
30092691IncompleteBC100566Nipped-B homolog (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_957684  NP_081983  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027707 NP_081983 Q6KCD5 HEAT
NM_201232 NP_957684   HEAT

Related Sequences

 
mRNAGenPeptSwissProt
BC025455 AAH25455 Q05CI1
BC055787 AAH55787 Q6KCD5
BC100566 AAI00567 Q497G5
AK016861 BAB30471 Q6KCD5
AK014915 BAC25453 Q6KCD5
AK049588 BAC33829 Q6KCD5
AK164261 BAE37707 Q3TPM9
AJ627033 CAF25291 Q6KCD5
AJ640138 CAG26692 Q6KCD5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nipbl NP_081983 R.norvegicus Nipbl 294787   NP_001099885 99
H.sapiens NIPBL 25836 Gene Info NP_597677 97
A.gambiae AgaP_AGAP009290 1280257   XP_320088 42
D.melanogaster Nipped-B 3355136   NP_001163052 42
A.thaliana EMB2773 831407   NP_001190317 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)