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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tbc1d9, TBC1 domain family, member 9
Sequence ID:NM_001111304
NM_027758
Entrez Gene ID:71310
Ensembl ID:ENSMUSG00000031709

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 C3

Chromosomal Position (from UCSC)

Chromosomal Position:8: 83259326 - 83271702

 Exon Info From UCSC:
NM_001111304
NM_027758

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6825869Full LengthBC057027TBC1 domain family, member 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082034  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111304 NP_001104774 Q3UYK3  
NM_027758 NP_082034   TBC

Related Sequences

 
mRNAGenPeptSwissProt
BC057027 AAH57027 Q6PGG9
AK017015 BAB30550 Q3UYK3
AK049049 BAC33525 Q3UYK3
AK077081 BAC36601 Q3UYK3
AK173050 BAD32328 Q3UYK3
AK134614 BAE22209 Q3UYK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tbc1d9 NP_001104774 R.norvegicus Tbc1d9 304645   NP_001128011 99
H.sapiens TBC1D9 23158 Gene Info NP_055945 96
C.elegans tbc-9 178316   NP_001122812 44
A.gambiae AgaP_AGAP006116 1276785   XP_316175 42
D.melanogaster CG7324 40361   NP_649305 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)