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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rapgef3, Rap guanine nucleotide exchange factor (GEF) 3
Sequence ID:NM_001177810
NM_001177811
NM_144850
Entrez Gene ID:223864
Ensembl ID:ENSMUSG00000022469

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 97744769 - 97757437

 Exon Info From UCSC:
NM_001177810
NM_001177811
NM_144850

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4236136Full LengthBC020532Rap guanine nucleotide exchange factor (GEF) 3
5041241IncompleteBC020311Rap guanine nucleotide exchange factor (GEF) 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659099  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001177810 NP_001171281    
NM_001177811 NP_001171282    
NM_144850 NP_659099 Q8VCC8 cNMP_binding
DEP
RasGEF
RasGEF_N

Related Sequences

 
mRNAGenPeptSwissProt
BC020311 AAH20311 Q8VCC8
BC020532 AAH20532 Q8VCC8
AK034265 BAC28653 Q8VCC8
AK137940 BAE23517 Q3UUV6
AK142594 BAE25120 Q3UQC2
AK162003 BAE36674 Q3TSK1
AK169430 BAE41171 Q3TES7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rapgef3 NP_001171281 R.norvegicus Rapgef3 59326   NP_067722 97
H.sapiens RAPGEF3 10411 Gene Info NP_001092001 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta