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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnfrsf13c, tumor necrosis factor receptor superfamily, member 13c
Sequence ID:NM_028075
Entrez Gene ID:72049
Ensembl ID:ENSMUSG00000068105

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 82221746 - 82224348

NM_028075 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115338205217382053705
153417378205414882054351
173819068205459782054765

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40044558Full LengthBC104126tumor necrosis factor receptor superfamily, member 13c
40044559Full LengthBC104127tumor necrosis factor receptor superfamily, member 13c

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028075 NP_082351 Q9D8D0
Q3SXS6
 

Related Sequences

 
mRNAGenPeptSwissProt
BC104126 AAI04127 Q3SXS7
BC104127 AAI04128 Q9D8D0
Q3SXS6
AF373847 AAK91827 Q9D8D0
Q3SXS6
AF350257 AAL83914 Q8R4W8
DQ294928 ABC24673 Q3SXS6
DQ294929 ABC24674 Q3SXS6
AK008142 BAB25490 Q9D8D0
Q3SXS6
AK156387 BAE33695 Q3U106
AK172406 BAE42991 Q3SXS7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfrsf13c NP_082351 R.norvegicus Tnfrsf13c 500910   XP_576316 87
H.sapiens TNFRSF13C 115650 Gene Info NP_443177 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta