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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlr7, toll-like receptor 7
Sequence ID:NM_133211
Entrez Gene ID:170743
Ensembl ID:ENSMUSG00000044583

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F5|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 167305213 - 167330514

NM_133211 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13555163742862163746416
35563654163767932163768030
36553746163768368163768459

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129519Full LengthBC120596toll-like receptor 7
40130662Full LengthBC132385toll-like receptor 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573474  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133211 NP_573474 Q548J0
P58681
LRR_1
TIR

Related Sequences

 
mRNAGenPeptSwissProt
BC120596 AAI20597 Q548J0
BC132385 AAI32386 Q548J0
AY035889 AAK62676 Q548J0
P58681
AF334942 AAL73191 Q548J0
P58681
AF334943 AAL73192 Q548J0
P58681
AK036549 BAC29472 Q548J0
P58681
AK154906 BAE32916 Q548J0
P58681
AK156908 BAE33892 Q548J0
P58681
AK172680 BAE43127 Q3T997

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlr7 NP_573474 R.norvegicus Tlr7 317468   NP_001091051 92
H.sapiens TLR7 51284 Gene Info NP_057646 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)