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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abca3, ATP-binding cassette, sub-family A (ABC1), member 3
Sequence ID:NM_001039581
NM_013855
Entrez Gene ID:27410
Ensembl ID:ENSMUSG00000024130

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 24377700 - 24384575

 Exon Info From UCSC:
NM_001039581
NM_013855

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30362309Full LengthBC079617ATP-binding cassette, sub-family A (ABC1), member 3
4236239IncompleteBC038271ATP-binding cassette, sub-family A (ABC1), member 3
4505671IncompleteBC020183ATP-binding cassette, sub-family A (ABC1), member 3
4973043IncompleteBC056614ATP-binding cassette, sub-family A (ABC1), member 3
4975187IncompleteBC049911ATP-binding cassette, sub-family A (ABC1), member 3
5044171IncompleteBC042663ATP-binding cassette, sub-family A (ABC1), member 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039581 NP_001034670    
NM_013855 NP_038883 Q8R420  

Related Sequences

 
mRNAGenPeptSwissProt
AF213394 AAF31433 Q9JL37
BC042663 AAH42663 Q80XT2
BC056614 AAH56614 Q6PHB8
BC079617 AAH79617 Q6AXE3
AY083616 AAL99380 Q8R420
AK007703 BAB25200 Q9CVK4
AK154698 BAE32771 Q8R420
AK165458 BAE38198 Q3TN91

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abca3 NP_038883 R.norvegicus Abca3 302973   XP_220219 96
H.sapiens ABCA3 21 Gene Info NP_001080 88
A.gambiae AgaP_AGAP006379 1276992   XP_557048 40
A.gambiae AgaP_AGAP012155 4577893   XP_320377 40
D.melanogaster CG1718 33103   NP_608445 40
A.gambiae AgaP_AGAP006380 5666864   XP_001688862 39
A.gambiae AgaP_AGAP012156 1280527   XP_552044 39
C.elegans abt-4 178559   NP_503175 38
A.gambiae AgaP_AGAP007504 1269722   XP_308371 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)