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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptpmt1, protein tyrosine phosphatase, mitochondrial 1
Sequence ID:NM_025576
Entrez Gene ID:66461
Ensembl ID:ENSMUSG00000063235

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 90910993 - 90917596

NM_025576 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16079075086990751475
6087999075414090754331
8008809075758590757665
8819809075776690757865
98213229075786690758206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5135841Full LengthBC026750protein tyrosine phosphatase, mitochondrial 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079852  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025576 NP_079852   DSPc

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC026750 AAH26750 Q66GT5 EC 3.1.3.16
EC 3.1.3.48
EC 3.1.3.27
AK012674 BAB28400 Q66GT5 EC 3.1.3.16
EC 3.1.3.48
EC 3.1.3.27
AK014691 BAB29504 Q66GT5 EC 3.1.3.16
EC 3.1.3.48
EC 3.1.3.27
AK151972 BAE30841 Q3U926  
BK005540 DAA05585 Q66GT5 EC 3.1.3.16
EC 3.1.3.48
EC 3.1.3.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptpmt1 NP_079852 R.norvegicus Ptpmt1 29390   NP_001099196 92
H.sapiens PTPMT1 114971 Gene Info NP_783859 84
A.gambiae AgaP_AGAP000617 1271617   XP_310464 47
D.melanogaster Plip 42807   NP_651180 44
A.thaliana AT5G56610 835762   NP_200472 37
C.elegans F28C6.8 174381   NP_495826 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)