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Gene Info

Gene Information For:Mm. Atp5b, ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
Sequence ID:NM_016774
Entrez Gene ID:11947
Ensembl ID:ENSMUSG00000025393

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 D3|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128083326 - 128090273

NM_016774 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1147127520362127520508
148330127520947127521129
331505127521352127521526
506627127522146127522267
628812127522497127522681
813971127523093127523251
9721094127523353127523475
10951307127525376127525588
13081509127526012127526213
15101879127527074127527443

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6494223Full LengthBC046616ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
3588728IncompleteBC018392ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
4920887IncompleteBC037127ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058054  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016774 NP_058054 P56480 EC 3.6.3.14 ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF030559 AAB86421 P56480 EC 3.6.3.14
BC018392 AAH18392 P56480 EC 3.6.3.14
BC037127 AAH37127 P56480 EC 3.6.3.14
BC046616 AAH46616 P56480 EC 3.6.3.14
DQ403100 ABD77233 P56480 EC 3.6.3.14
AK003460 BAB22802 P56480 EC 3.6.3.14
AK010314 BAB26846 P56480 EC 3.6.3.14
AK084009 BAC39095 P56480 EC 3.6.3.14
AK145684 BAE26587 P56480 EC 3.6.3.14
AK148891 BAE28692 P56480 EC 3.6.3.14
AK150599 BAE29691 P56480 EC 3.6.3.14
AK151081 BAE30095 P56480 EC 3.6.3.14
AK151600 BAE30540 P56480 EC 3.6.3.14
AK152788 BAE31497 P56480 EC 3.6.3.14
AK152976 BAE31630 P56480 EC 3.6.3.14
AK153099 BAE31720 P56480 EC 3.6.3.14
AK159444 BAE35088 P56480 EC 3.6.3.14
AK159737 BAE35331 P56480 EC 3.6.3.14
AK159978 BAE35529 P56480 EC 3.6.3.14
AK160199 BAE35689 P56480 EC 3.6.3.14
AK160608 BAE35911 P56480 EC 3.6.3.14
AK164383 BAE37764 P56480 EC 3.6.3.14
AK166525 BAE38829 P56480 EC 3.6.3.14
AK166603 BAE38888 P56480 EC 3.6.3.14
AK166979 BAE39161 P56480 EC 3.6.3.14
AK167119 BAE39267 P56480 EC 3.6.3.14
AK167160 BAE39301 P56480 EC 3.6.3.14
AK167728 BAE39769 P56480 EC 3.6.3.14
AK167764 BAE39797 P56480 EC 3.6.3.14
AK168692 BAE40537 P56480 EC 3.6.3.14
AK168941 BAE40749 P56480 EC 3.6.3.14
AK169184 BAE40961 P56480 EC 3.6.3.14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp5b NP_058054 R.norvegicus Atp5b 171374   NP_599191 98
H.sapiens ATP5B 506 Gene Info NP_001677 96
D.melanogaster ATPsyn-beta 43829   NP_726631 90
A.gambiae AgaP_AGAP012081 1280592   XP_320446 88
A.gambiae AgaP_AGAP012106 1280570   XP_320423 85
C.elegans atp-2 175716   NP_498111 83
S.pombe atp2 2541927   NP_593151 80
N.crassa NCU05430 3879401   XP_963253 80
S.cerevisiae ATP2 853585   NP_012655 79
P.falciparum PFL1725w 811397   XP_001350751 77
A.thaliana AT5G08670 830768   NP_568203 76
A.thaliana AT5G08680 830769   NP_680155 76
A.thaliana AT5G08690 830770   NP_568204 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)