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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2afb1, H2A histone family, member B1
Sequence ID:NM_026627
Entrez Gene ID:68231
Ensembl ID:ENSMUSG00000062651

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 17996417 - 17996931

NM_026627 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15251791804817918572

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6774311Full LengthBC061062RIKEN cDNA 1700113O17 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080903  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026627 NP_080903 Q9CQ70 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC061062 AAH61062 Q9CQ70
EU079024 ABU52995 Q9CQ70
AK006586 BAB24661 Q9CQ70
AK015538 BAB29887 Q9CQ70
AK018839 BAB31458 Q9CQ70
AK018922 BAB31484 Q9CQ70
AK018951 BAB31492 Q9CQ70
AK018962 BAB31496 Q9CQ70
AK160415 BAE35779 Q9CQ70

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2afb1 NP_080903 M.musculus Gm16501 100042840 Gene Info NP_001106866 86
M.musculus Gm6026 547210 Gene Info NP_001171040 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)