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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. C1qtnf1, C1q and tumor necrosis factor related protein 1
Sequence ID:NM_001204129
NM_001204130
NM_019959
Entrez Gene ID:56745
Ensembl ID:ENSMUSG00000017446

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 118433852 - 118449963

Transcript StartTranscript EndChromosomal Start Chromosomal End
150118295166118295215
51209118305005118305163
210349118307814118307953
3502512118309114118311276

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4018549Full LengthBC049894C1q and tumor necrosis factor related protein 1
5012138IncompleteBC037636C1q and tumor necrosis factor related protein 1
5052332IncompleteBC023468C1q and tumor necrosis factor related protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064343  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204129 NP_001191058    
NM_001204130 NP_001191059    
NM_019959 NP_064343 Q9QXP7 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
AF192499 AAF06664 Q9QXP7
BC023468 AAH23468 Q8R1P2
BC049894 AAH49894 Q9QXP7
DQ002394 AAY21926 Q9QXP7
AK005484 BAB24070 Q9QXP7
AK145104 BAE26237 Q9QXP7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1qtnf1 NP_064343 R.norvegicus C1qtnf1 303701   NP_001007676 92
H.sapiens C1QTNF1 114897 Gene Info NP_112230 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)