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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mrpl20, mitochondrial ribosomal protein L20
Sequence ID:NM_025570
Entrez Gene ID:66448
Ensembl ID:ENSMUSG00000029066

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4 83.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 155803644 - 155808776

NM_025570 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1125155177726155177850
126236155177941155178051
237314155181016155181093
315665155182587155182937

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1244957Full LengthBC039985mitochondrial ribosomal protein L20
3158162Full LengthBC016591mitochondrial ribosomal protein L20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079846  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025570 NP_079846 Q9CQL4 Ribosomal_L20

Related Sequences

 
mRNAGenPeptSwissProt
BC016591 AAH16591 Q91YJ4
BC039985 AAH39985 Q9CQL4
AK004053 BAB23143 Q9CQL4
AK011341 BAB27555 Q9CQL4
AK015199 BAB29744 Q9CQL4
AB049645 BAB40850 Q9CQL4
AK168665 BAE40517 Q9CQL4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrpl20 NP_079846 R.norvegicus Mrpl20 680747   NP_001102898 96
H.sapiens MRPL20 55052 Gene Info NP_060441 88
A.thaliana AT1G16740 838245   NP_173118 44
A.gambiae AgaP_AGAP001311 5667583   XP_001689366 42
D.melanogaster mRpL20 39477   NP_524051 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)