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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hps4, Hermansky-Pudlak syndrome 4 homolog (human)
Sequence ID:NM_138646
Entrez Gene ID:192232
Ensembl ID:ENSMUSG00000042328

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 59.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 112343124 - 112344378

 Exon Info From UCSC:
NM_138646

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5701206Full LengthBC063055Hermansky-Pudlak syndrome 4 homolog (human)
3498652IncompleteBC004668Hermansky-Pudlak syndrome 4 homolog (human)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138646 NP_619587 Q6P568
Q99KG7
 

Related Sequences

 
mRNAGenPeptSwissProt
BC004668 AAH04668 Q99KG7
BC063055 AAH63055 Q6P568
AY043415 AAK95332 Q541V2
Q99KG7
AK129418 BAC98228 Q541V2
Q99KG7
AK171871 BAE42710 Q3TAF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hps4 NP_619587 R.norvegicus Hps4 304555   NP_001100618 83
H.sapiens HPS4 89781 Gene Info NP_071364 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)